Progressive multifocal leukoencephalopathy (PML) is associated with the polyomavirus JC virus, while BK virus is causative of polyomavirus-associated nephropathy. We report the first definitive case of BK virus-associated PML. This case highlights the importance of biopsy for aetiologic diagnosis in the setting of viral latency and the absence of clear T-cell dysfunction or biologic therapy.
Clinical record
A 71-year-old woman with a low-grade B-cell non-Hodgkin lymphoma was referred by her haematologist for investigation of a 2-week history of progressive apraxia and right-sided neglect. Her past medical history also included Sjögren syndrome and hypogammaglobulinaemia. Her non-Hodgkin lymphoma was complicated by bone marrow infiltration, low-grade lymphadenopathy and splenomegaly. She had received oral chlorambucil 3 years before, but had not been on any therapy for the past 18 months as her disease was stable. She was receiving 6-weekly immunoglobulin infusions at the time of admission.
On examination, the patient had right upper-limb drift and incoordination, with normal power, reflexes and tone throughout. She had difficulty following three-step commands, and had paraphasia and constructional apraxia. She did not have palpable lymphadenopathy but had an enlarged spleen 10 cm below the costal margin. A computed tomography scan of the chest, abdomen and pelvis revealed stable lymphadenopathy and splenomegaly. Full blood examination and chemistry showed stable mild trilineage pancytopenia with a haemoglobin level of 110 g/L (reference interval [RI], 115–160 g/L), white cell count of 3.6 × 109/L (RI, 4–11 × 109/L) and platelet count of 118 × 109/L (RI, 150–400 × 109/L). Her lactate dehydrogenase level was not elevated. Her liver function test results showed a cholestatic pattern of liver dysfunction with an alkaline phosphatase level of 132 U/L (RI, 20–110 U/L) and a gammaglutamyl transferase level of 72 U/L (RI, 12–43 U/L). She also had stage 3b chronic kidney disease with an associated creatinine level of 157 μmol/L (RI, 40–90 μmol/L). Her CD4+ lymphocyte count was 210 × 106/L (RI, 600–1400 × 106/L). The patient was HIV negative. Her cerebrospinal fluid (CSF) showed five mononuclear lymphocytes (RI, < 5 white cells, all mononuclear) and seven erythrocytes (RR, zero), a normal protein level and no abnormality on lymphocytic immunophenotypic analysis. Real-time 59-nuclease polymerase chain reaction (PCR) assays specific for JC virus (JCV) DNA and BK virus (BKV) DNA were performed on DNA extracted from the CSF. The probes and primers used (Box 1) targeted the coding region of the large T-antigen. JCV DNA was not detected; BKV DNA was detected at a viral load of 11 975 copies/mL (normally undetectable). Cryptococcal antigen testing on serum and CSF was negative, as were PCR tests for Epstein–Barr virus DNA and toxoplasma DNA on CSF. Gadolinium-enhanced magnetic resonance imaging (MRI) of the brain showed two areas of abnormality in the posterior left frontal lobe in the subcortical and the periventricular regions. These areas showed low signal on T1-weighted imaging and high signal on T2-weighted (Box 2) and FLAIR (fluid attenuated inversion recovery) imaging. The deep white matter lesion showed peripheral enhancement. Additionally, non-specific high-T2 signal periventricular abnormalities were found.
While these investigations were proceeding, the patient’s neurological state deteriorated. Although the MRI findings were thought more likely to be consistent with progressive multifocal leukoencephalopathy (PML), a negative PCR result for JCV DNA was against this diagnosis. Consequently, a trial of dexamethasone was administered, as the main radiological differential diagnosis was lymphoma. The patient’s symptoms did not improve. After receipt of the positive PCR result for BKV DNA in the CSF, the possibility of BKV-associated PML was entertained, but as this had not previously been definitively described, a brain biopsy was deemed necessary for a definitive diagnosis. The patient underwent a brain biopsy 1 month after admission.
Deep and superficial brain biopsy samples were taken, yielding eight fragments of tissue 2–4 mm in maximum extent. Sections stained with haematoxylin and eosin showed reactive gliosis with occasional large atypical astrocytes, numerous foamy macrophages and a sparse perivascular mononuclear infiltrate (Box 3). Immunohistochemistry using antibodies for glial fibrillary acidic protein and neurofilaments showed gliosis with relative sparing of axons, in keeping with demyelination. Sections were stained using BK antibody directed against the BKV large T-antigen (Clone BK-T.1, Chemicon International). Intranuclear inclusions in scattered cells stained positively for BKV (Box 3). JCV staining was not performed. Electron microscopy with a JEOL JEM 1011 transmission electron microscope was performed on reprocessed paraffin block material and confirmed the presence of spherical viral particles measuring 40–45 nm, consistent with polyomavirus (Box 4). Cells containing polyomavirus particles showed oligodendrocytic differentiation. Nuclei were large and the cytoplasm showed numerous polyribosomes and rough endoplasmic reticulum. The same PCR protocol as described above was performed on the brain biopsy tissue and was strongly positive for BKV DNA but negative for JCV DNA. Extracted DNA was amplified by an in-house BKV DNA PCR using the primers modified from those originally described.1 The resulting PCR product was sequenced with the same primers, and sequences were confirmed to be BKV DNA using a National Center for Biotechnology Information BLAST search (http://blast.ncbi.nlm.nih.gov). Sequences were 100% concordant with BKV isolate SJH-LG-310 (GenBank accession number JN192440).
A diagnosis of BKV-associated PML was made and, given the irreversible underlying immune deficits, age and progressive neurologic status, a palliative approach was taken. The patient died 6 weeks after undergoing the brain biopsy.
Discussion
The polyomaviruses BK and JC commonly infect humans and remain latent in immunocompetent individuals.2 Both are associated with clinical disease in the setting of immunosuppression — BKV with polyomavirus-associated nephropathy and haemorrhagic cystitis, and JCV with PML.
More recently, BKV has been described as an emerging pathogen in the central nervous system.3 However, its true pathogenicity is complicated by its known central nervous system latency in asymptomatic immunocompetent and immunocompromised individuals.4 This confounds any possible new pathogenic associations with disease.
BKV is newly recognised as a causative agent of meningoencephalitis and has been demonstrated in the tissue and CSF of affected patients.5–8 To our knowledge, there have been two proposed cases of BKV-associated PML described in the literature. However, definitive diagnoses were not made in these cases, as both relied on BKV isolated from CSF as a surrogate marker, with no evidence of BKV in the tissue.9,10 Given the problem of latency in multiple tissues, though, it was plausible to assert that BKV was the causative agent. Nevertheless, a brain biopsy was deemed necessary for diagnosis in the case we describe.
JCV-associated PML is most commonly associated with HIV/AIDS. It is also known to occur in patients with multiple sclerosis who are treated with natalizumab and in individuals with idiopathic CD4+ lymphopenia and other T-cell deficient states.11,12 It is plausible to assume that, similarly, a T-cell immunodeficiency may be necessary to predispose an individual to BKV-induced PML. Although the patient described had both Sjögren syndrome and a haematological malignancy with known hypogammaglobulinaemia, her T-cell count was above that generally associated with HIV-associated PML, at 210 cells/μL at the time of diagnosis. However, a functional T-cell impairment is still a possible predisposing factor for the development of disease in this case.
In our patient, the presence of BKV DNA without JCV DNA in the CSF brain biopsy specimens, and the associated findings on histopathology and electron microscopy, support the diagnosis of BKV-induced PML. Although JCV-specific immunohistochemistry was not performed, the stain used is reportedly specific for BKV and does not cross-react with JCV or the related polyomavirus, Simian virus 40.13 DNA sequencing definitively established the presence of BKV DNA in our patient’s brain tissue and, consequently, we suggest that this evidence supports our diagnosis of the first biopsy-proven case of BKV-associated PML.
1 JC virus (JCV) and BK virus (BKV) large T-antigen primers and probes
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Designation
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Sequence, 59–39
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Primer
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BKV forward
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TGCTTCTTCATCACTGGCAAAC
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BKV reverse
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GGTGCCAACCTATGGAACAGA
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JCV forward
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TGATGGTTAAAGTGATTTGGCTGAT
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JCV reverse
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TTGCTTATGGGCATGTACTTAGACTTT
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Probe
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BKV
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CACCAGGACTCCCAC (6-FAM fluorophore and MGB-NF quencher*)
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JCV
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TCACATTTTTTGCATTGCT (6-FAM fluorophore
and MGB-NF quencher*)
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* FAM = 6-carboxyfluorescein. MGB-NF = minor-groove binding
non-fluorescence.
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2 Gadolinium-enhanced magnetic resonance image of the patient’s brain
T2-weighted image showing high signal in the periventricular (solid arrow) and subcortical (dashed arrow) white matter of the posterior left frontal lobe. ◆
3 Stained histological sections of the patient’s deep brain biopsy specimen
Main image: Haematoxylin and eosin staining (original magnification, 340) showing two cells with well defined intranuclear inclusions. Insert: Immunoperoxidase staining for BK-T antigen showing variable but focally strong nuclear staining (original magnification, 340). ◆
4 Transmission electron micrograph of viral particles in the patient’s deep brain biopsy specimen
Main image: Part of an infected glial cell (C) and part of the cell nucleus (N) (original magnification, 330 000). A myelinated axon can also be seen (arrow). Insert: A nucleus with polyoma-type viral particles 40–45 nm in diameter (original magnification, 3120 000). ◆